TAP GARP_ARR-B in Panicum virgatum

Full lineage¹: cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliopsida; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum; Panicum sect. Hiantes

Protein source: Phytozome (proteins from primary transcripts)


The colour code corresponds to the rules for the domains:

should be contained
should not be contained

Domain rules


(Domain names are clickable)
Please note: One of the domains G2-like_Domain and Myb_DNA-binding are sufficient for a protein to be classified as TAP GARP_ARR-B.


List of proteins (19)

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namename additionClick button to show/hide sequence: Download sequence?
Pavir.Aa03151.1.ppacid=30250708 transcript=Pavir.Aa03151.1 locus=Pavir.Aa03151 ID=Pavir.Aa03151.1.v1.1 annot-version=v1.1
Pavir.Ab00568.1.ppacid=30232404 transcript=Pavir.Ab00568.1 locus=Pavir.Ab00568 ID=Pavir.Ab00568.1.v1.1 annot-version=v1.1
Pavir.Da02067.1.ppacid=30191807 transcript=Pavir.Da02067.1 locus=Pavir.Da02067 ID=Pavir.Da02067.1.v1.1 annot-version=v1.1
Pavir.Db00207.1.ppacid=30260075 transcript=Pavir.Db00207.1 locus=Pavir.Db00207 ID=Pavir.Db00207.1.v1.1 annot-version=v1.1
Pavir.Db00757.1.ppacid=30261135 transcript=Pavir.Db00757.1 locus=Pavir.Db00757 ID=Pavir.Db00757.1.v1.1 annot-version=v1.1
Pavir.Ea03527.1.ppacid=30230098 transcript=Pavir.Ea03527.1 locus=Pavir.Ea03527 ID=Pavir.Ea03527.1.v1.1 annot-version=v1.1
Pavir.Ga02354.1.ppacid=30302889 transcript=Pavir.Ga02354.1 locus=Pavir.Ga02354 ID=Pavir.Ga02354.1.v1.1 annot-version=v1.1
Pavir.Ga02356.1.ppacid=30303489 transcript=Pavir.Ga02356.1 locus=Pavir.Ga02356 ID=Pavir.Ga02356.1.v1.1 annot-version=v1.1
Pavir.Gb02032.1.ppacid=30223070 transcript=Pavir.Gb02032.1 locus=Pavir.Gb02032 ID=Pavir.Gb02032.1.v1.1 annot-version=v1.1
Pavir.Gb02311.1.ppacid=30222463 transcript=Pavir.Gb02311.1 locus=Pavir.Gb02311 ID=Pavir.Gb02311.1.v1.1 annot-version=v1.1
Pavir.Ia00770.1.ppacid=30213832 transcript=Pavir.Ia00770.1 locus=Pavir.Ia00770 ID=Pavir.Ia00770.1.v1.1 annot-version=v1.1
Pavir.Ia04946.1.ppacid=30210968 transcript=Pavir.Ia04946.1 locus=Pavir.Ia04946 ID=Pavir.Ia04946.1.v1.1 annot-version=v1.1
Pavir.Ib00832.1.ppacid=30237767 transcript=Pavir.Ib00832.1 locus=Pavir.Ib00832 ID=Pavir.Ib00832.1.v1.1 annot-version=v1.1
Pavir.Ib00921.1.ppacid=30237383 transcript=Pavir.Ib00921.1 locus=Pavir.Ib00921 ID=Pavir.Ib00921.1.v1.1 annot-version=v1.1
Pavir.J00035.1.ppacid=30196796 transcript=Pavir.J00035.1 locus=Pavir.J00035 ID=Pavir.J00035.1.v1.1 annot-version=v1.1
Pavir.J08270.1.ppacid=30191359 transcript=Pavir.J08270.1 locus=Pavir.J08270 ID=Pavir.J08270.1.v1.1 annot-version=v1.1
Pavir.J10177.1.ppacid=30243469 transcript=Pavir.J10177.1 locus=Pavir.J10177 ID=Pavir.J10177.1.v1.1 annot-version=v1.1
Pavir.J23046.1.ppacid=30196332 transcript=Pavir.J23046.1 locus=Pavir.J23046 ID=Pavir.J23046.1.v1.1 annot-version=v1.1
Pavir.J35630.1.ppacid=30202318 transcript=Pavir.J35630.1 locus=Pavir.J35630 ID=Pavir.J35630.1.v1.1 annot-version=v1.1
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A list of species letter codes included in the protein names can be found here (opens in new tab).

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¹ Information recieved using NCBI E-utilities and NCBI taxonomy database.
Impressum